PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028118563.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 146aa    MW: 17144.8 Da    PI: 8.7346
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028118563.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.53.6e-112199386
                    EE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
              B3  3 kvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
                    kvl  s++  ++ l +p+    ++  g+   +s  + + d sgr W++ +i+r+ +++ + ++ W + v++n+L+eg++v+F+++ 
  XP_028118563.1 21 KVL--SHMDITHTLEIPNAA--NYlpGH---NSANMFVWDNSGRPWNLHMIIRRDQRKALRREEWLRLVRENELEEGETVTFYYIP 99
                    566..666666777787664..455443...4668************************************************984 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MRALCWRTDS RVDMGHYCFG KVLSHMDITH TLEIPNAANY LPGHNSANMF VWDNSGRPWN  60
LHMIIRRDQR KALRREEWLR LVRENELEEG ETVTFYYIPA CNSYFTLWNL KALTTFGLCS  120
SFLLTKTRTQ GGTCNKNMLL FLVYVT