PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028118689.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 568aa MW: 64541.6 Da PI: 7.7535

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028118689.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	28.4	5.6e-09	6	51	49	90
FAR1 49 ekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 ek+r ++a tr+gCka+++++ + gk++vt+++ +HnHela XP_028118689.1 6 EKSRAPKALTRVGCKAQFRIRYDAddgeGGKYVVTHFVADHNHELA 51 678999*************987666678************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MDRVAEKSRA PKALTRVGCK AQFRIRYDAD DGEGGKYVVT HFVADHNHEL AEQHCVMYLR 60 SHRSLNSADK AQAMAIRNVG VKTSQIMNYM VNQSGSYENV GFIRTDLHNH IQAERRAEVE 120 DGDAQGALVY LCAKLDVDAP NETIETYTWV LETFMEAMGN KAPVSVLTDG DKAMQEAIRR 180 VFPDARHRLC NSHLGKNAVS NVHISGFAHA FKQCMDMETD ETKFEHDWTT MVEKFGLQTN 240 SWVLETYEKR HMWAEAYMRG HFFAGMKSTQ RSECMNAYFN PFLQHKLKLY EFVRHYDRAL 300 ARIRYNEAGD DAETNNTFPF ESLGLPCCHM ICVMKAENLT QIPPTCVLHR WTRAASKDGQ 360 QWPQPSIDST TTQTARYGIL CSSYNEMCFH ASQSTEGFKD ARDACLPMTS RMKKLYERNL 420 NDGNGDKGKH SFHRQFGVED PNVMKTKGNP GRASSNCRRP RKCGNCKCIG HTKRTCPKVR 480 FSRTVGTNSD ADTPHITDCE YNAESLPVRC KTGLVDLSTP HIKQRRLFFN VSPDSEQPVG 540 QYGSVEAVMW KNDSNTIDEV NQVDSTSY

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MDRVAEKSRA PKALTRVGCK AQFRIRYDAD DGEGGKYVVT HFVADHNHEL AEQHCVMYLR  60
SHRSLNSADK AQAMAIRNVG VKTSQIMNYM VNQSGSYENV GFIRTDLHNH IQAERRAEVE  120
DGDAQGALVY LCAKLDVDAP NETIETYTWV LETFMEAMGN KAPVSVLTDG DKAMQEAIRR  180
VFPDARHRLC NSHLGKNAVS NVHISGFAHA FKQCMDMETD ETKFEHDWTT MVEKFGLQTN  240
SWVLETYEKR HMWAEAYMRG HFFAGMKSTQ RSECMNAYFN PFLQHKLKLY EFVRHYDRAL  300
ARIRYNEAGD DAETNNTFPF ESLGLPCCHM ICVMKAENLT QIPPTCVLHR WTRAASKDGQ  360
QWPQPSIDST TTQTARYGIL CSSYNEMCFH ASQSTEGFKD ARDACLPMTS RMKKLYERNL  420
NDGNGDKGKH SFHRQFGVED PNVMKTKGNP GRASSNCRRP RKCGNCKCIG HTKRTCPKVR  480
FSRTVGTNSD ADTPHITDCE YNAESLPVRC KTGLVDLSTP HIKQRRLFFN VSPDSEQPVG  540
QYGSVEAVMW KNDSNTIDEV NQVDSTSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-30	FAR1 family protein