PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028118727.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 398aa MW: 44512.6 Da PI: 5.4342

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028118727.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	100.7	2.1e-31	55	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........ 77 lp+G++F+P+d el+ e+L++k+ + + ++ v ke +i++++P++Lp +k++ ++++fF+++ ++yatg+rk+r+ XP_028118727.1 55 LPAGVKFDPSDIELL-EHLAAKCGVGNskphmfI--DDfiltVDKEEGICYTHPENLP-GAKKDGSSVHFFHRTTNAYATGQRKRRKihnqdslt 145 799**********.999999876664555332..333221233447******.55677899***************868888885 PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++ +W++tgk+k v++ +g ++g kk++v+y +++ +k+ k++Wvmh+y+l XP_028118727.1 146 KEDVRWHKTGKTKLVME-NGVQKGFKKIMVLYriSKKGSKPDKSNWVMHQYHL 197 55899*******9.999*******6646777888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MARSWLIDCK GIATKVKSAS LSPAYQLKDC GANRECPKCH YRIDNSDVSH EWPGLPAGVK 60 FDPSDIELLE HLAAKCGVGN SKPHMFIDDF ILTVDKEEGI CYTHPENLPG AKKDGSSVHF 120 FHRTTNAYAT GQRKRRKIHN QDSLTKEDVR WHKTGKTKLV MENGVQKGFK KIMVLYRISK 180 KGSKPDKSNW VMHQYHLGTD EDELEGQYVV SKISYQQQKQ SDNNDSSQVI EDSDMGMIRT 240 SPRTPKTNTP NPPRPGKYVL CDDVTDDYVL PPQSLAQEAE FARETFHPSF STQFKNDMET 300 HTCLAGESQA IDGNGLDDLL LCNEIFDSYA ALADSGLNDS PFSTSSRPTN DNNSGVDRNV 360 TCGIADLENL ELDTPPDFQL ADLQFGSQES ILGWLDRL

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MARSWLIDCK GIATKVKSAS LSPAYQLKDC GANRECPKCH YRIDNSDVSH EWPGLPAGVK  60
FDPSDIELLE HLAAKCGVGN SKPHMFIDDF ILTVDKEEGI CYTHPENLPG AKKDGSSVHF  120
FHRTTNAYAT GQRKRRKIHN QDSLTKEDVR WHKTGKTKLV MENGVQKGFK KIMVLYRISK  180
KGSKPDKSNW VMHQYHLGTD EDELEGQYVV SKISYQQQKQ SDNNDSSQVI EDSDMGMIRT  240
SPRTPKTNTP NPPRPGKYVL CDDVTDDYVL PPQSLAQEAE FARETFHPSF STQFKNDMET  300
HTCLAGESQA IDGNGLDDLL LCNEIFDSYA ALADSGLNDS PFSTSSRPTN DNNSGVDRNV  360
TCGIADLENL ELDTPPDFQL ADLQFGSQES ILGWLDRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	1e-95	NAC family protein