PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028118823.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 132aa    MW: 14716.1 Da    PI: 6.7727
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028118823.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB109.81.7e-3446124296
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     reqdrflPianvsrimkk+lP nakis  +ketvqec+sefisf+t                gddllwa++tlGfe+yveplkvyl ++r++eg+
  XP_028118823.1  46 REQDRFLPIANVSRIMKKALPVNAKISTSTKETVQECISEFISFIT----------------GDDLLWAMTTLGFEEYVEPLKVYLLRFRDMEGK 124
                     89******************************************87................79****************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MDSKVPHPIP TPKLTHLTPL LPPPPPPPES DPSGGHNNSN SKLSPREQDR FLPIANVSRI  60
MKKALPVNAK ISTSTKETVQ ECISEFISFI TGDDLLWAMT TLGFEEYVEP LKVYLLRFRD  120
MEGKICCVLF GN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.13e-46NF-YB family protein