PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028119173.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 249aa    MW: 28490.5 Da    PI: 6.4055
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028119173.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR189.64.2e-2880168289
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     +Y++YAk+vGF +r+ + ++s+r+g++++r+f C+keg+r ++kk  + + r++r+ tr gCka+++v+kek+gkw v+kle+eH+H+l
  XP_028119173.1  80 CYDAYAKRVGFVIRVGNCHRSSRDGSVISRRFLCNKEGFRVNNKKVkRLEVRKPREITREGCKAMIMVRKEKSGKWIVAKLETEHSHPL 168
                     6***************************************9988873567899**********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MNFSTCMGEH YKMIAEPGMP DADMDNKMME NSVGREICVS EGGEMFNLYD ERDLIVHEID  60
GNVEPCIGME FESEEAAMAC YDAYAKRVGF VIRVGNCHRS SRDGSVISRR FLCNKEGFRV  120
NNKKVKRLEV RKPREITREG CKAMIMVRKE KSGKWIVAKL ETEHSHPLGI PAGKGRRGTI  180
QARPQDEKDK KIRELSTQLQ RANQQLAECQ KQLDMVLKDI EQHTSHLTKS IQEIVANVKE  240
VEDEEEDQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.15e-61FAR1 family protein