PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028119175.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 243aa    MW: 27806.7 Da    PI: 6.4073
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028119175.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR189.74e-2874162289
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     +Y++YAk+vGF +r+ + ++s+r+g++++r+f C+keg+r ++kk  + + r++r+ tr gCka+++v+kek+gkw v+kle+eH+H+l
  XP_028119175.1  74 CYDAYAKRVGFVIRVGNCHRSSRDGSVISRRFLCNKEGFRVNNKKVkRLEVRKPREITREGCKAMIMVRKEKSGKWIVAKLETEHSHPL 162
                     6***************************************9988873567899**********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MGEHYKMIAE PGMPDADMDN KMMENSVGRE ICVSEGGEMF NLYDERDLIV HEIDGNVEPC  60
IGMEFESEEA AMACYDAYAK RVGFVIRVGN CHRSSRDGSV ISRRFLCNKE GFRVNNKKVK  120
RLEVRKPREI TREGCKAMIM VRKEKSGKWI VAKLETEHSH PLGIPAGKGR RGTIQARPQD  180
EKDKKIRELS TQLQRANQQL AECQKQLDMV LKDIEQHTSH LTKSIQEIVA NVKEVEDEEE  240
DQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.13e-61FAR1 family protein