PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028119233.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 281aa    MW: 31991.1 Da    PI: 9.1381
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028119233.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR148.92.1e-1548135191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +fY +YAk++GF +  ++ +    +g+++     C +  kr+++++   +  ++  +++++Ckak++ +++ dg++++t+++leH+H+l p
  XP_028119233.1  48 EFYAKYAKNLGFAIAYRTRNV-GADGKVKYFGIECARVQKRTKRSEV--NPLKPALSSKIDCKAKVRATLQPDGRYKLTTVVLEHTHDLIP 135
                     6*************9887665.59999************99999876..9999***********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDIDSNNPIL SGGEKVEEAE NSPLLNESGE IEEPKKVMFF TSKQKVHEFY AKYAKNLGFA  60
IAYRTRNVGA DGKVKYFGIE CARVQKRTKR SEVNPLKPAL SSKIDCKAKV RATLQPDGRY  120
KLTTVVLEHT HDLIPSDSQH FPMNKRIRTL VKRRLEINDE AGIGVSRNFH SIVVEARGYE  180
ALTFDERDAR NHVENARRLR LGVGDAESVA FYFYRMQQEN SNFYSAIDFD VDGRIRNLFW  240
VDARSMAAYK AFGDVVSFDT TYLTNKYDMS FAPSVGVNHH G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.22e-39FAR1 family protein