PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028119282.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 732aa MW: 84377.2 Da PI: 8.3148

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028119282.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.8	2.8e-26	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+ + kk k +++ ++r +vC+keg+r+ +k++ ++++raetrtgC+a+l +k+++ +gk++vt+++++HnH+l+ XP_028119282.1 25 EFYNTYGGRMGFSIRRYYCKKDKFTNQLIHRLLVCNKEGFRKVDKRD-PLSKNSRAETRTGCEARLYIKLHEgNGKYVVTDFKEKHNHDLV 114 6*****************************************999.9999***********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 732 aa Download sequence
MEPENDCDWK PKLGMIFDSE QCAYEFYNTY GGRMGFSIRR YYCKKDKFTN QLIHRLLVCN 60 KEGFRKVDKR DPLSKNSRAE TRTGCEARLY IKLHEGNGKY VVTDFKEKHN HDLVSPECAH 120 MLPSQRKIST TQAIQLDLAA QSGLRLDQSF ELMGREAGGR QCLGFTKLDS KNYLRTKRQQ 180 SLAYGEVGKV LQYFKEKSLQ NPSFFYAVQL DNEEQITNMF WADAQMIMDY AQFGDVVTFD 240 TTYKLNKEHR PFASFVGFNH HRETVIFGAA LLYDETAESF VWLFENFLQA MSRKAPKTLF 300 TDQDAAMAKA IPIVMPDTSH RLCTWHLMQN ALKHVNCLFQ DKGVKGVLNK FFFHIEDANQ 360 WKLEWAEMLD KYDAHENHWL KLTFAEKEKW GWPYVRSTWA AGMSTTQLSE SFNAFLKDYI 420 RSDFNLNEFF MHFERVLYEK RYKELEAGYA LCQRLPKVKA TIRMLIQMGN VYTKKIFEEF 480 QNEYFQSIES DIEAIEYGEA STMYTVVDVG NKHARKVKME RDGSLGCNCT KFEREGILCC 540 HSLKVIRDIL KMKEVPPQYI LKRWTKQARA ETVQHIKEND IEVDVKFQQA SRYKTLMTAF 600 RAVASRAAET EETYDFCIAH LATLGADFEG KLSAHFGVGN EVRNDDGTQS FEVECEDVNH 660 VVQPKGLKKN VATSKGKRRV KGGFEAALVA NSKKKSRANI LASSQSIASS TVAPSPLSVG 720 GDIYVREQVP PF

Sequence ? help Back to Top

Protein Sequence Length: 732 aa Download sequence

MEPENDCDWK PKLGMIFDSE QCAYEFYNTY GGRMGFSIRR YYCKKDKFTN QLIHRLLVCN  60
KEGFRKVDKR DPLSKNSRAE TRTGCEARLY IKLHEGNGKY VVTDFKEKHN HDLVSPECAH  120
MLPSQRKIST TQAIQLDLAA QSGLRLDQSF ELMGREAGGR QCLGFTKLDS KNYLRTKRQQ  180
SLAYGEVGKV LQYFKEKSLQ NPSFFYAVQL DNEEQITNMF WADAQMIMDY AQFGDVVTFD  240
TTYKLNKEHR PFASFVGFNH HRETVIFGAA LLYDETAESF VWLFENFLQA MSRKAPKTLF  300
TDQDAAMAKA IPIVMPDTSH RLCTWHLMQN ALKHVNCLFQ DKGVKGVLNK FFFHIEDANQ  360
WKLEWAEMLD KYDAHENHWL KLTFAEKEKW GWPYVRSTWA AGMSTTQLSE SFNAFLKDYI  420
RSDFNLNEFF MHFERVLYEK RYKELEAGYA LCQRLPKVKA TIRMLIQMGN VYTKKIFEEF  480
QNEYFQSIES DIEAIEYGEA STMYTVVDVG NKHARKVKME RDGSLGCNCT KFEREGILCC  540
HSLKVIRDIL KMKEVPPQYI LKRWTKQARA ETVQHIKEND IEVDVKFQQA SRYKTLMTAF  600
RAVASRAAET EETYDFCIAH LATLGADFEG KLSAHFGVGN EVRNDDGTQS FEVECEDVNH  660
VVQPKGLKKN VATSKGKRRV KGGFEAALVA NSKKKSRANI LASSQSIASS TVAPSPLSVG  720
GDIYVREQVP PF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-123	FAR1 family protein