PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028119408.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 284aa    MW: 30663 Da    PI: 7.1311
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028119408.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.8e-10164210454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka iL + ++YI+sL
  XP_028119408.1 164 SHSLAERARREKIGERMKILQDLVPGC----NKVIGKALILDEIINYIQSL 210
                     8*************************9....677***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MDPPIINLTS FSAANPSSYS LAEIWPCPIN GNVVGSGGGL GLRMSNLTGF CDSASNRDVS  60
MDESTVTEQS GSRSGGGGRK RRDASSGDDE SSNLSGNDLN NSDGKRMKLS RSRVENGGSN  120
SKSKMESNSG QGNMAAEKHT KPSEEPNKQD YIHVRARRGQ ATDSHSLAER ARREKIGERM  180
KILQDLVPGC NKVIGKALIL DEIINYIQSL HHQVEFLSMK LEAVNSRMNS TIEVFPSKDL  240
GTPTFDAAAA AGMIFSSQAT REYVQGSQTE WLHMQVGSSF DRAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.11e-70bHLH family protein