PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028119537.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 449aa MW: 50050.7 Da PI: 9.8334

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028119537.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.7	5.3e-08	131	171	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT+eE ++l d+++++ + + Ia +++ Rt +q+k+r++ XP_028119537.1 131 WTKEETDQLFDLCERFDLR-FVVIADRFPSSRTVEQLKDRYY 171 *****************.*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MDAKDILGLP KTPLPLPQEK KSRPQKDSQR KPDGISREVY ALTGGLAPLM PSIDVAQLKR 60 RTQSENEKIT WQWLPFSNSA RKDSLQLYHW VRVVNAVPPT GDYSFAKYNK SVDIVKYTDE 120 EYEKHLTDPM WTKEETDQLF DLCERFDLRF VVIADRFPSS RTVEQLKDRY YSASRAILIS 180 RASSPGDVSG HPIVKEPYNV SQEIERKRAL SMVLSQTKQQ ERKDAEVLAE AKKISESRMA 240 ARGAEESELP VTSNVGAEGT ERAIVLVDTT SPSSSVQFAS ANVAPPTSIA ESASVATSLR 300 VLRVYTRTYA LDQMVQAASS SAGLRTIKRV EQTLQDLGVN LKPKVPTKAV CAEHLELRKE 360 ILTLLNLQKQ LQNKEAEGSS YRDGSYAETP NTPKDRTFIP EPFSFGGNIL SDKVGKRDQK 420 RKAPGRLSDA PSSPAQSNKR PRKLKASDG

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MDAKDILGLP KTPLPLPQEK KSRPQKDSQR KPDGISREVY ALTGGLAPLM PSIDVAQLKR  60
RTQSENEKIT WQWLPFSNSA RKDSLQLYHW VRVVNAVPPT GDYSFAKYNK SVDIVKYTDE  120
EYEKHLTDPM WTKEETDQLF DLCERFDLRF VVIADRFPSS RTVEQLKDRY YSASRAILIS  180
RASSPGDVSG HPIVKEPYNV SQEIERKRAL SMVLSQTKQQ ERKDAEVLAE AKKISESRMA  240
ARGAEESELP VTSNVGAEGT ERAIVLVDTT SPSSSVQFAS ANVAPPTSIA ESASVATSLR  300
VLRVYTRTYA LDQMVQAASS SAGLRTIKRV EQTLQDLGVN LKPKVPTKAV CAEHLELRKE  360
ILTLLNLQKQ LQNKEAEGSS YRDGSYAETP NTPKDRTFIP EPFSFGGNIL SDKVGKRDQK  420
RKAPGRLSDA PSSPAQSNKR PRKLKASDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47210.1	0.0	MYB_related family protein