PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028119731.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 227aa    MW: 25551.8 Da    PI: 8.8125
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028119731.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.5e-2084132355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r+++ +g+W+AeIrdp     +  r++lg++ taeeAa a+++a+k+++g
  XP_028119731.1  84 YRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTYNTAEEAAIAYDEAAKRIRG 132
                     9*******.**********94....35************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MCGGAIISDF VPDHWSRKLT TTDLWSELDP FSSDFFGLGS HGFKDLSSQS DNKKTTTRKP  60
KQLNKGKKSE GAKSQTQRTR KNIYRGIRQR PWGKWAAEIR DPQKGVRVWL GTYNTAEEAA  120
IAYDEAAKRI RGDKAKLNFA QPPPTPPPAK RRCVIPESTQ VSPLPTEPPP PPQVNCLDEF  180
EFKEQISSLE SFLGLDSVLT QFEGLGEANS VNLWMLEDLH HQNPLVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.12e-47ERF family protein