PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028119757.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ARR-B

Protein Properties

Length: 355aa MW: 39859.1 Da PI: 10.0364

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028119757.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	75.3	8e-24	239	291	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +r+ Wt LH++Fv+av+qL G +kA+Pk+il++m+ + ++++ v+SHLQkYR XP_028119757.1 239 KRVSWTAVLHSKFVDAVRQL-GVDKAVPKKILDIMNEPEISRQSVASHLQKYRN 291 69****************.******************************6 PP
2	Myb_DNA-binding	32.6	1.8e-10	240	290	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r +WT+ ++ ++vdav+qlG + +k+I m+ ++ ++ s++qky+ XP_028119757.1 240 RVSWTAVLHSKFVDAVRQLGVDkaVPKKILDIMNePEISRQSVASHLQKYR 290 679******************************99***********7 PP
3	Response_reg	80	8e-27	98	206	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + ++l++ +l+k +y +v++++++++al++l++++ +D++++D+ m +m+G+ell+ i e ++p+i+++a++++e + + ++ G XP_028119757.1 98 VLVVDDNAVCLKLVAALLNKCRY-KVTATTKATKALKMLRKNKksYDIVITDVVMLDMNGFELLEIIGLEM-DMPVIMMSANDDKESVMKGVRHG 190 89*******************.***********888888****************996644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a+d+l Kp+ ee+ + XP_028119757.1 191 ARDYLIKPVRLEEVKN 206 *******9999865 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MAKISVKEWD MVKTLNEFRI QVESQCTRAY LSAQKVMPKL INEVLEAQKH DQEVAYIKGH 60 LESGEPMPNW IEAVHASLNR AAPPQSRVNA NFPEGLSVLV VDDNAVCLKL VAALLNKCRY 120 KVTATTKATK ALKMLRKNKK SYDIVITDVV MLDMNGFELL EIIGLEMDMP VIMMSANDDK 180 ESVMKGVRHG ARDYLIKPVR LEEVKNIWQH VVRKNLFNTT KSGTVQAGTD QNPPIPSSKR 240 VSWTAVLHSK FVDAVRQLGV DKAVPKKILD IMNEPEISRQ SVASHLQKYR NALRKENTKA 300 KMSQESKNNI NSNKTNGLLS NTITTSCINQ GLNTINHHNR FAEQYMSTGI TSFGS

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MAKISVKEWD MVKTLNEFRI QVESQCTRAY LSAQKVMPKL INEVLEAQKH DQEVAYIKGH  60
LESGEPMPNW IEAVHASLNR AAPPQSRVNA NFPEGLSVLV VDDNAVCLKL VAALLNKCRY  120
KVTATTKATK ALKMLRKNKK SYDIVITDVV MLDMNGFELL EIIGLEMDMP VIMMSANDDK  180
ESVMKGVRHG ARDYLIKPVR LEEVKNIWQH VVRKNLFNTT KSGTVQAGTD QNPPIPSSKR  240
VSWTAVLHSK FVDAVRQLGV DKAVPKKILD IMNEPEISRQ SVASHLQKYR NALRKENTKA  300
KMSQESKNNI NSNKTNGLLS NTITTSCINQ GLNTINHHNR FAEQYMSTGI TSFGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31920.1	1e-67	ARR-B family protein