PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028119916.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 393aa MW: 46500.5 Da PI: 8.7794

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028119916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	47.1	8e-15	2	80	11	89
FAR1 11 GFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 Fs+r++ +k+k +++ ++r +v +keg+++ +k++ ++++raetrtgC+a+l vk+++ +gk++vt+++++Hn +l XP_028119916.1 2 RFSIRRHFCRKNKFTNQLICRLLVYNKEGFQKVDKRD-PLTKNPRAETRTGCEARLYVKLDEgTGKFVVTDFKEKHNNDL 80 7*******************************999.999**********************************887 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MRFSIRRHFC RKNKFTNQLI CRLLVYNKEG FQKVDKRDPL TKNPRAETRT GCEARLYVKL 60 DEGTGKFVVT DFKEKHNNDL ISPEYAHMLP SQRKISTTQA IELDLAAQSG LCLGQSFELM 120 GREAGGRQCL GFTKLDQKNY LRTKRQQSLV YGEVCNVLQY FKEKSLQNPP FFYAFQLDNE 180 EQITNMFWDD AQMIMDYVQF GDVVTFDTTY KLNKEHRPFA SFVEFNHYRE TIIFGAALLY 240 DETAESFDYI RSDFNLNEFF MHFERVLYEK RYKELEARYV LCQRLPKVKA TIRMLIQIGN 300 VYTKKIFEKF QNEYFRSIES DIEAIEYGEA SAIYTVVDVG NKHARKVKIE RDGSLGCNCT 360 KFERERILCC HSLKVIRDMM KMKEVPLQYI LKR

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MRFSIRRHFC RKNKFTNQLI CRLLVYNKEG FQKVDKRDPL TKNPRAETRT GCEARLYVKL  60
DEGTGKFVVT DFKEKHNNDL ISPEYAHMLP SQRKISTTQA IELDLAAQSG LCLGQSFELM  120
GREAGGRQCL GFTKLDQKNY LRTKRQQSLV YGEVCNVLQY FKEKSLQNPP FFYAFQLDNE  180
EQITNMFWDD AQMIMDYVQF GDVVTFDTTY KLNKEHRPFA SFVEFNHYRE TIIFGAALLY  240
DETAESFDYI RSDFNLNEFF MHFERVLYEK RYKELEARYV LCQRLPKVKA TIRMLIQIGN  300
VYTKKIFEKF QNEYFRSIES DIEAIEYGEA SAIYTVVDVG NKHARKVKIE RDGSLGCNCT  360
KFERERILCC HSLKVIRDMM KMKEVPLQYI LKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-50	FAR1 family protein