PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028119944.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 176aa    MW: 19646.1 Da    PI: 7.6295
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028119944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.51.7e-067096430
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
             HLH  4 ahnerErrRRdriNsafeeLrellPka 30
                    +h+ +Er RR++i +++  L++l+P +
  XP_028119944.1 70 SHSLAERARREKIGERMKILQDLVPGC 96
                    8************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MLDRHNNSDG KQMKSSRSRV ENGGSNSKSK MESNSGQGNM AVEKHTKPSE QPNKQDYIHV  60
RTRRGQATDS HSLAERARRE KIGERMKILQ DLVPGCNKVP HVTRTDYQLI DISEDGFVSL  120
LIENGNTKDD LKLPTDESLL SQIKDGFAEG KDLIVLVMCV MGEEQINALK DIGPKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48560.14e-26bHLH family protein