PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028120056.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 870aa MW: 99061.9 Da PI: 9.0444

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028120056.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.7	6.8e-17	104	189	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YAk+vGFs+ +++ ++ge Cs+ gkr ++++ + +++ +t+++Cka+++ +++kdg++++t+++leHnH+l XP_028120056.1 104 FYAKYAKHVGFSIACKTQVIG-DDGELRYFGVECSRLGKRIKKSEV--NPLKPSLSTKIDCKARVRASLQKDGRFMLTTVNLEHNHDLI 189 9***********9988776.8999**********998766..999**********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 870 aa Download sequence
MPDGSRYDYR IVKKKKKKIQ DNFDDEKIDF KRSVSFICPL PFVSSTVRRL LPPPPSDVLV 60 GVGIPSEMEI DSNTVENPLL NESEEVEEPK RGMCFTSKQE AYTFYAKYAK HVGFSIACKT 120 QVIGDDGELR YFGVECSRLG KRIKKSEVNP LKPSLSTKID CKARVRASLQ KDGRFMLTTV 180 NLEHNHDLIP TDSRHFAMNK KILSPVKRRL EINDQAGIGV SRNYNSMVVE AGGYESLTFD 240 ERDARNYIER ARKLRLGEGN SDALQKYFLR MQAQNSSFYY MIDVDIDFRI RNLFWADAMS 300 RAAYEEFGDV VSFDTTYLTN KYDMPFAPFV GVNHHGQSIL LGCGLLSSED TDTFVWLFKS 360 WLNCMSDHPP KAIITDQCKA MQKAIEIVFP NTRHRLCLWH IMKKIPEKLK EYSQYESMKM 420 DLQNVVYDTF TKDEFEMKWK EMIAKFNLYE NQWLGVLYDE RHRWVPVEKE KKADFKSRHK 480 VFDCLTVYGF EKQFQDAYTN AKFKEVQAEM KRLVYCQPFL IKEEGSICTY FVKEAMVVFG 540 KMKHVDFVVY SNSTEFDVQC MCRLFEFRGI MCAHSLVVLI ARCINEVPNK YILPRWRKNL 600 DRGYTCIKAT YTGFGDDFNA KVYDKMNRKL IGIVQFAGNF EGKIKLIDCG LDEIKAKVMK 660 DDEGGGSNVA PSTSNVPPIT SNVSSFPIGS INGKAISHTK LLSPLVARRK GRPVTKRKVA 720 KVDQIVNRLK ASKRKHNKSK GTKVIGGEGE GEGQCQSQLE RGARRELYPY MVGMENSICV 780 PGHMVNAIGG TSVTPASVDI MRGQSFMNTP TQIYGVGTSP TLSDCIGGTP GFMTTQQSMI 840 ATHQIYGAVP SSFVDLNVQM DRNDHGGSFR

Sequence ? help Back to Top

Protein Sequence Length: 870 aa Download sequence

MPDGSRYDYR IVKKKKKKIQ DNFDDEKIDF KRSVSFICPL PFVSSTVRRL LPPPPSDVLV  60
GVGIPSEMEI DSNTVENPLL NESEEVEEPK RGMCFTSKQE AYTFYAKYAK HVGFSIACKT  120
QVIGDDGELR YFGVECSRLG KRIKKSEVNP LKPSLSTKID CKARVRASLQ KDGRFMLTTV  180
NLEHNHDLIP TDSRHFAMNK KILSPVKRRL EINDQAGIGV SRNYNSMVVE AGGYESLTFD  240
ERDARNYIER ARKLRLGEGN SDALQKYFLR MQAQNSSFYY MIDVDIDFRI RNLFWADAMS  300
RAAYEEFGDV VSFDTTYLTN KYDMPFAPFV GVNHHGQSIL LGCGLLSSED TDTFVWLFKS  360
WLNCMSDHPP KAIITDQCKA MQKAIEIVFP NTRHRLCLWH IMKKIPEKLK EYSQYESMKM  420
DLQNVVYDTF TKDEFEMKWK EMIAKFNLYE NQWLGVLYDE RHRWVPVEKE KKADFKSRHK  480
VFDCLTVYGF EKQFQDAYTN AKFKEVQAEM KRLVYCQPFL IKEEGSICTY FVKEAMVVFG  540
KMKHVDFVVY SNSTEFDVQC MCRLFEFRGI MCAHSLVVLI ARCINEVPNK YILPRWRKNL  600
DRGYTCIKAT YTGFGDDFNA KVYDKMNRKL IGIVQFAGNF EGKIKLIDCG LDEIKAKVMK  660
DDEGGGSNVA PSTSNVPPIT SNVSSFPIGS INGKAISHTK LLSPLVARRK GRPVTKRKVA  720
KVDQIVNRLK ASKRKHNKSK GTKVIGGEGE GEGQCQSQLE RGARRELYPY MVGMENSICV  780
PGHMVNAIGG TSVTPASVDI MRGQSFMNTP TQIYGVGTSP TLSDCIGGTP GFMTTQQSMI  840
ATHQIYGAVP SSFVDLNVQM DRNDHGGSFR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	712	722	RPVTKRKVAKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-104	FAR1 family protein