PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028120168.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HD-ZIP
Protein Properties Length: 206aa    MW: 24077.2 Da    PI: 9.8965
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028120168.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.56.3e-203690256
                    T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++++f++eq++ Le++Fe++ ++  +++ +LA++lgL+ rq+ +WFqNrRa++k
  XP_028120168.1 36 KNKRRFSDEQIRSLESMFESETKLEPRKKVQLARELGLQPRQIAIWFQNRRARWK 90
                    67889*************************************************9 PP
2HD-ZIP_I/II124.55.1e-4037128293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     +krr+s+eq+++LE++Fe+e+kLep++Kv+lareLglqprq+a+WFqnrRAR+k+kq+E++y++Lk++yd+l+++ e+L+ e+++L  +l++
  XP_028120168.1  37 NKRRFSDEQIRSLESMFESETKLEPRKKVQLARELGLQPRQIAIWFQNRRARWKSKQMEQEYKVLKANYDNLHSKFESLKIEKQSLLIQLQN 128
                     79************************************************************************************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MEGEEYYCAP QPLEATKIES LPFPKPLQNL RKKKNKNKRR FSDEQIRSLE SMFESETKLE  60
PRKKVQLARE LGLQPRQIAI WFQNRRARWK SKQMEQEYKV LKANYDNLHS KFESLKIEKQ  120
SLLIQLQNLT DLLGKPHNQG IKSKDSKENI TSGGSDSKDT RREPELHNMG GQVDGSLALP  180
EKWSNFESSG LFDRSCGSSN WWDFWS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18593RRARWKSKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.14e-42HD-ZIP family protein