PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028120273.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 84aa    MW: 9919.72 Da    PI: 10.7108
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028120273.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2316.5e-103574349
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49
                     +GV++  k+ +W A I++      +k+++lg  g+ e Aa+++++ 
  XP_028120273.1 35 MRGVYF--KNMKWQAAIKVD-----KKQIHLGIVGSQEAAARLYDRK 74
                    79**99..47*********4.....5******************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    
MHKCHPMYCT IGVPEVKRRK QHRTKHFENQ EPCLMRGVYF KNMKWQAAIK VDKKQIHLGI  60
VGSQEAAARL YDRKSREVAL IVRT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11421PEVKRRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.28e-25ERF family protein