PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028120281.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 191aa    MW: 22210.9 Da    PI: 6.5476
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028120281.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR153.29.7e-173199171
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkke 71
                    +fYn+Y++++GFs+r+ + +k+ ++g+it+r fvC+keg+r  +k++   ++++r+e rt+C+ +l  +++
  XP_028120281.1 31 NFYNAYGEMMGFSIRRGYVNKN-KEGQITSRLFVCNKEGFRGVDKRD-PLTKNPRQEVRTECTHMLPFQRK 99
                    6********************9.6677*****************999.999************99988776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MEPNNVENDG GDYDWKPRVH MTFDTEQEAY NFYNAYGEMM GFSIRRGYVN KNKEGQITSR  60
LFVCNKEGFR GVDKRDPLTK NPRQEVRTEC THMLPFQRKI SASQATEIDL AEKSRIWLNA  120
AFELMGNEAG GRESLGFTKV DQKNYLRTKR QKSLAYGEAG SILQYFREKT LENPSFFYLV  180
QLDSEEQITN I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-24FAR1 family protein