PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028120457.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 372aa MW: 42771.5 Da PI: 6.1178

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028120457.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.4	2.6e-14	55	141	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YAk++GF+v+ +++ ++g+++ C++ kr+++++ + +++ ++ ++Cka+++ +++kd+++++t+++leH+H+l XP_028120457.1 55 SFYAKYAKHLGFTVTYRTQIIG-QDGKVKYFGIECTRARKRTKRSEV--HPLEPSLSSFIECKAQVRATLQKDERFKLTTVVLEHTHDLI 141 5***********99987776.8888***********99877..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
LHELHASIDI DSNNPSLNGS EKVEETENNP SLNEIGEVEE PKKGMCFSSK QEVYSFYAKY 60 AKHLGFTVTY RTQIIGQDGK VKYFGIECTR ARKRTKRSEV HPLEPSLSSF IECKAQVRAT 120 LQKDERFKLT TVVLEHTHDL IPSDSRHFAM NKRILTPVKR RLEINDEVGI GVARNFHSIV 180 VEGGGYEALT FDERDARNYI QRVNHHGQSI LLGCELLSNE NTETFVWLFR EWLSCMSDVP 240 PKAIITDQCR AMQNAIEVAF PQARHRVNHH GQSILLGCEL LSNENTETFV WLFREWLSCM 300 SDVPLKAIIT DQCRAMQNAI EVVFPQARHL YDCFTKDEFD EEWQAIIAKF KLDDNEWLGH 360 YTVSNIGGFL LM

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

LHELHASIDI DSNNPSLNGS EKVEETENNP SLNEIGEVEE PKKGMCFSSK QEVYSFYAKY  60
AKHLGFTVTY RTQIIGQDGK VKYFGIECTR ARKRTKRSEV HPLEPSLSSF IECKAQVRAT  120
LQKDERFKLT TVVLEHTHDL IPSDSRHFAM NKRILTPVKR RLEINDEVGI GVARNFHSIV  180
VEGGGYEALT FDERDARNYI QRVNHHGQSI LLGCELLSNE NTETFVWLFR EWLSCMSDVP  240
PKAIITDQCR AMQNAIEVAF PQARHRVNHH GQSILLGCEL LSNENTETFV WLFREWLSCM  300
SDVPLKAIIT DQCRAMQNAI EVVFPQARHL YDCFTKDEFD EEWQAIIAKF KLDDNEWLGH  360
YTVSNIGGFL LM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-34	FAR1 family protein