PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028120559.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 229aa    MW: 26690.2 Da    PI: 9.6932
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028120559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR173.64.2e-2331119190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y  ++GFs+r+   +k+ ++g+it+r fvC+k+g+r  +k++ ++++++r+e rtgC+a+l +k ++  +k+ v +++++HnH + 
  XP_028120559.1  31 NFYNAYTGRLGFSIRRGCVNKN-KEGKITSRLFVCNKKGFRGVDKRD-SSAKNPRQEVRTGCQARLIIKWDRnIHKFFVGEFVEQHNHIFI 119
                     6*****************9999.6677*****************999.9********************999899*************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MEPNNAENDR GDCDWKPRVH MTFETEQEAY NFYNAYTGRL GFSIRRGCVN KNKEGKITSR  60
LFVCNKKGFR GVDKRDSSAK NPRQEVRTGC QARLIIKWDR NIHKFFVGEF VEQHNHIFIP  120
TECTHMLPSQ RKIFASQATE IDFAEKSRIR LNAAFELMGK EAGGRESLGF TKVDQKNYLR  180
TKRQKSLAYG KAGSILQYFR EKTLENPSFF YSIQLDSEEQ ITNIFWADT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-42FAR1 family protein