PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028120566.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 224aa    MW: 25929.5 Da    PI: 9.32
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028120566.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR183.14.7e-2625114190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++ Fs+r+++ kk+k +++i++r++vC+keg+r+ +k++   ++++raetrtgC+a+l vk++  +gk++v++++++HnHel+
  XP_028120566.1  25 DFYNAYGGRMRFSIRRKYCKKNKLTKQIISRNLVCNKEGFRKVDKRD-PLTKTPRAETRTGCEARLFVKLDVnSGKFVVIDFKEKHNHELV 114
                     6*******************************************999.9999*******************99****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MEPDNDCGWK PKVGMTFDSE ESAYDFYNAY GGRMRFSIRR KYCKKNKLTK QIISRNLVCN  60
KEGFRKVDKR DPLTKTPRAE TRTGCEARLF VKLDVNSGKF VVIDFKEKHN HELVSLDCAH  120
MLPSQRKISD TQVIELDLAS ESGLRLGQSF ELMGREAGGQ QSLGFMKLDQ KNYLRTKRQK  180
SLAYGEVGNV LQYFQQKSLE NPSFFYAFQL DNEEQITNMF WANA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-43FAR1 family protein