PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028120630.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 209aa    MW: 24229.4 Da    PI: 6.8785
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028120630.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR187.71.6e-2743132190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     kfY+eYAk+vGF +r+++ ++s+ +++i +r++ C+k+g+  +++++   +r++r++tr gCka++ vk +k gkw vt++e+eH+H+l+
  XP_028120630.1  43 KFYDEYAKRVGFVMRIDQCRRSEVDKRILSRRLSCNKQGYYVKSRDRFGPARKPRSTTREGCKAMMLVKVNKAGKWAVTRFEKEHTHPLV 132
                     6***************************************99999999****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MELDVGDGNV DSSVRMELGA SEEGVIQEPY VGMEFDSEEA AKKFYDEYAK RVGFVMRIDQ  60
CRRSEVDKRI LSRRLSCNKQ GYYVKSRDRF GPARKPRSTT REGCKAMMLV KVNKAGKWAV  120
TRFEKEHTHP LVISGHPSHD ATDTKDRRIQ ELTMELERQD QLCDLYREQI ITFLKKVEEQ  180
TEVLSTKIQD VVNNVRELET EVPNAPHHH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.15e-68FAR1 family protein