PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028120633.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 232aa    MW: 26358.2 Da    PI: 8.4706
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028120633.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR181.91.1e-2568156190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     kfY +YA+++GF vr+ + ++s+ +g++  r++ C+k+g++ ++ +      ++r+  r gCka++ vk+ek+gkw+vt++++eHnH+l+
  XP_028120633.1  68 KFYMDYARQIGFVVRIMQRRRSEADGRTLARRLGCNKQGFSPNHGTI-GPDMKPRPCAREGCKATILVKLEKSGKWVVTRFVKEHNHPLV 156
                     6****************************************999888.9***************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MGYITECAKE KILLHFHGYC TRYCLLVELD EGEGAVDIAA EGNISVGRGE VLEPYVGMEF  60
DSEDASRKFY MDYARQIGFV VRIMQRRRSE ADGRTLARRL GCNKQGFSPN HGTIGPDMKP  120
RPCAREGCKA TILVKLEKSG KWVVTRFVKE HNHPLVVTEQ GPSNVGDKDK KIEALTRELQ  180
RQDQLCAAYR EKLLKFLANV EQEAEQLSSK IQLIVDNVRK VEAEVQKLSQ RR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.11e-67FAR1 family protein