PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028120634.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 206aa    MW: 23301.6 Da    PI: 8.6205
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028120634.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR182.38.4e-2642130190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     kfY +YA+++GF vr+ + ++s+ +g++  r++ C+k+g++ ++ +      ++r+  r gCka++ vk+ek+gkw+vt++++eHnH+l+
  XP_028120634.1  42 KFYMDYARQIGFVVRIMQRRRSEADGRTLARRLGCNKQGFSPNHGTI-GPDMKPRPCAREGCKATILVKLEKSGKWVVTRFVKEHNHPLV 130
                     6****************************************999888.9***************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MELDEGEGAV DIAAEGNISV GRGEVLEPYV GMEFDSEDAS RKFYMDYARQ IGFVVRIMQR  60
RRSEADGRTL ARRLGCNKQG FSPNHGTIGP DMKPRPCARE GCKATILVKL EKSGKWVVTR  120
FVKEHNHPLV VTEQGPSNVG DKDKKIEALT RELQRQDQLC AAYREKLLKF LANVEQEAEQ  180
LSSKIQLIVD NVRKVEAEVQ KLSQRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.18e-69FAR1 family protein