PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028120765.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 155aa    MW: 18065.6 Da    PI: 8.3718
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028120765.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR189.74.1e-281199189
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89
                    +fYneY++ vGFs+r+++ +ksk++g +t+r+fvC keg+re++k+  +  +++r+etrt+Cka ++++ +   +kw v+k++++HnH+l
  XP_028120765.1 11 EFYNEYGRIVGFSIRRDYCNKSKKDGVMTSRKFVCCKEGEREKDKRY-TMIKNPRSETRTNCKAFMHISFKWdLSKWIVSKFDNNHNHPL 99
                    6*******************************************999.99*******************88769**************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MEFPSEEAAY EFYNEYGRIV GFSIRRDYCN KSKKDGVMTS RKFVCCKEGE REKDKRYTMI  60
KNPRSETRTN CKAFMHISFK WDLSKWIVSK FDNNHNHPLH LPQCTHLMPS QRKVCDAQGI  120
TIDIADETRI SLKASHDLIS AIAGGKEFVG FTWED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-25FAR1 family protein