PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028120836.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family LBD
Protein Properties Length: 217aa    MW: 23275.3 Da    PI: 8.4286
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028120836.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26099.14.2e-312103197
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr++C+++C+l+ ++     p++q++++ +v+k+FG++ ++++++++p ++r+d+++sl++eA+ r+ +Pv+Gavg++++++++++q+
  XP_028120836.1   2 SCNGCRVLRKGCSENCILRSCLqsidsPDSQAHATLFVAKFFGRAGLMSFISSVPSNQRPDLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQA 96 
                     6*********************9999999****************************************************************** PP

          DUF260  91 kaelall 97 
                     +++++l+
  XP_028120836.1  97 AVQTVLR 103
                     *998776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MSCNGCRVLR KGCSENCILR SCLQSIDSPD SQAHATLFVA KFFGRAGLMS FISSVPSNQR  60
PDLFQSLLFE ACGRTVNPVN GAVGLLWTGN WHVCQAAVQT VLRGGTLRPI PEFLADETSE  120
AEVTCTDMFK LNQDPEPKSR SNDQLGNLRL SLTPCSSSRG GGSGGALNFQ SSPKKRRPGT  180
PSMNSEESVT TTCFQSGGFR DAFAQRGGGG KLLNLFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.11e-74LBD family protein