PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028120869.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 348aa MW: 38780.4 Da PI: 9.1283

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028120869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.4	2.9e-53	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLkkk++ +l++ ++i+e+d+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++ XP_028120869.1 15 LPPGFRFHPTDEELVVHYLKKKASLAPLPV-TIIAEIDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTS 108 79**************************.89***********8888999*********************************998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy g+ pkg kt+W+mheyrl XP_028120869.1 109 nGTQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 142 67788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MESTDSSSGS QHLHLPPGFR FHPTDEELVV HYLKKKASLA PLPVTIIAEI DLYKFDPWEL 60 PSKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSNG TQKVGVKKAL 120 VFYGGKPPKG IKTNWIMHEY RLIDNNSSTF KPPGSDPTTK KVSLRLDDWV LCRIYKKNNS 180 SRPTEEREDH MLVSNSTILD GHNSNQKLAA SRASNYGALL EHEENFFQGI LNNGVGMQNS 240 EISQLTSPNT KPDVSMASTS PPMKRTVPTQ YWNNEPALKR FHGDQHENTS TRVLEGNNGS 300 SFVSLLNHQL VPQSGGGGSF QPNTLDVGSL GDGVLSQHFH LPSMNWNL

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MESTDSSSGS QHLHLPPGFR FHPTDEELVV HYLKKKASLA PLPVTIIAEI DLYKFDPWEL  60
PSKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSNG TQKVGVKKAL  120
VFYGGKPPKG IKTNWIMHEY RLIDNNSSTF KPPGSDPTTK KVSLRLDDWV LCRIYKKNNS  180
SRPTEEREDH MLVSNSTILD GHNSNQKLAA SRASNYGALL EHEENFFQGI LNNGVGMQNS  240
EISQLTSPNT KPDVSMASTS PPMKRTVPTQ YWNNEPALKR FHGDQHENTS TRVLEGNNGS  300
SFVSLLNHQL VPQSGGGGSF QPNTLDVGSL GDGVLSQHFH LPSMNWNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	1e-112	NAC family protein