PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028121033.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 423aa MW: 47181.8 Da PI: 7.7045

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028121033.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.6	6e-33	46	100	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wt++LHe+F+eav+qLGG++kAtPkt+l+lm+v+gLtl+h+kSHLQkYRl XP_028121033.1 46 KPRLKWTKDLHEQFIEAVNQLGGADKATPKTVLKLMGVPGLTLYHLKSHLQKYRL 100 79****************************************************8 PP
2	Myb_DNA-binding	61.1	2.3e-19	48	99	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+kt+ + mg g+tl+++ks++qky+ XP_028121033.1 48 RLKWTKDLHEQFIEAVNQLGGAdkaTPKTVLKLMGvPGLTLYHLKSHLQKYR 99 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MYHHHHHQGK NIHPSSRGSI PPERHLFLQW GNGAGDSGLV PSTNTKPRLK WTKDLHEQFI 60 EAVNQLGGAD KATPKTVLKL MGVPGLTLYH LKSHLQKYRL SKNLHGHSNI GTNKIGMVVV 120 TGERMSEANG THMSNSGIGT QTNKSLHISE AIRMQIEVQT RLHEQLEVQR HLQLRIEAQG 180 KYLQAVLEKA QETLGRQNLG TVGLEAAKVQ ISELVSKVST QCLNSTFSGL KELSGLCPPH 240 PTQTSQPTDC SMDSCLTSCE GSQRDQETHN NGIGLITFNG NARLEPKEFD NEPMLQQTEL 300 RWCEDMKEDR KFLSSMNKNI ERAFPIEINS NDLSMGVGFQ GGNGNSSRSY SDRRFRGSDE 360 GLNFLHQTTN RTDSVSVQRE DEKISSRGYK VPYFAPTLDL NARDENDAAS NCKQLDLNGF 420 GWN

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MYHHHHHQGK NIHPSSRGSI PPERHLFLQW GNGAGDSGLV PSTNTKPRLK WTKDLHEQFI  60
EAVNQLGGAD KATPKTVLKL MGVPGLTLYH LKSHLQKYRL SKNLHGHSNI GTNKIGMVVV  120
TGERMSEANG THMSNSGIGT QTNKSLHISE AIRMQIEVQT RLHEQLEVQR HLQLRIEAQG  180
KYLQAVLEKA QETLGRQNLG TVGLEAAKVQ ISELVSKVST QCLNSTFSGL KELSGLCPPH  240
PTQTSQPTDC SMDSCLTSCE GSQRDQETHN NGIGLITFNG NARLEPKEFD NEPMLQQTEL  300
RWCEDMKEDR KFLSSMNKNI ERAFPIEINS NDLSMGVGFQ GGNGNSSRSY SDRRFRGSDE  360
GLNFLHQTTN RTDSVSVQRE DEKISSRGYK VPYFAPTLDL NARDENDAAS NCKQLDLNGF  420
GWN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-141	G2-like family protein