PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028121035.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 419aa MW: 46795.3 Da PI: 7.7045

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028121035.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.6	5.9e-33	46	100	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wt++LHe+F+eav+qLGG++kAtPkt+l+lm+v+gLtl+h+kSHLQkYRl XP_028121035.1 46 KPRLKWTKDLHEQFIEAVNQLGGADKATPKTVLKLMGVPGLTLYHLKSHLQKYRL 100 79****************************************************8 PP
2	Myb_DNA-binding	61.2	2.2e-19	48	99	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+kt+ + mg g+tl+++ks++qky+ XP_028121035.1 48 RLKWTKDLHEQFIEAVNQLGGAdkaTPKTVLKLMGvPGLTLYHLKSHLQKYR 99 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MYHHHHHQGK NIHPSSRGSI PPERHLFLQW GNGAGDSGLV PSTNTKPRLK WTKDLHEQFI 60 EAVNQLGGAD KATPKTVLKL MGVPGLTLYH LKSHLQKYRL SKNLHGHSNI GTNKIVTGER 120 MSEANGTHMS NSGIGTQTNK SLHISEAIRM QIEVQTRLHE QLEVQRHLQL RIEAQGKYLQ 180 AVLEKAQETL GRQNLGTVGL EAAKVQISEL VSKVSTQCLN STFSGLKELS GLCPPHPTQT 240 SQPTDCSMDS CLTSCEGSQR DQETHNNGIG LITFNGNARL EPKEFDNEPM LQQTELRWCE 300 DMKEDRKFLS SMNKNIERAF PIEINSNDLS MGVGFQGGNG NSSRSYSDRR FRGSDEGLNF 360 LHQTTNRTDS VSVQREDEKI SSRGYKVPYF APTLDLNARD ENDAASNCKQ LDLNGFGWN

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MYHHHHHQGK NIHPSSRGSI PPERHLFLQW GNGAGDSGLV PSTNTKPRLK WTKDLHEQFI  60
EAVNQLGGAD KATPKTVLKL MGVPGLTLYH LKSHLQKYRL SKNLHGHSNI GTNKIVTGER  120
MSEANGTHMS NSGIGTQTNK SLHISEAIRM QIEVQTRLHE QLEVQRHLQL RIEAQGKYLQ  180
AVLEKAQETL GRQNLGTVGL EAAKVQISEL VSKVSTQCLN STFSGLKELS GLCPPHPTQT  240
SQPTDCSMDS CLTSCEGSQR DQETHNNGIG LITFNGNARL EPKEFDNEPM LQQTELRWCE  300
DMKEDRKFLS SMNKNIERAF PIEINSNDLS MGVGFQGGNG NSSRSYSDRR FRGSDEGLNF  360
LHQTTNRTDS VSVQREDEKI SSRGYKVPYF APTLDLNARD ENDAASNCKQ LDLNGFGWN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-137	G2-like family protein