PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028121195.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 226aa    MW: 26163.6 Da    PI: 8.378
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028121195.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR179.56.1e-2527116190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++G s+r++  +k+k +++ ++r +vC+keg+r+ +k++   ++++raetrtgC+a+l vk+++ +gk++vt+++++HnH+l+
  XP_028121195.1  27 DFYNTYGGRMGSSIRRDFCRKNKFTNQLICRLLVCNKEGFRKGDKRD-PLSKNPRAETRTGCEARLYVKLDEdTGKYVVTDFKEKHNHDLV 116
                     6*******************************************999.999********************99****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MDMEPENDCA WKPKQGMTFD SEQCVYDFYN TYGGRMGSSI RRDFCRKNKF TNQLICRLLV  60
CNKEGFRKGD KRDPLSKNPR AETRTGCEAR LYVKLDEDTG KYVVTDFKEK HNHDLVSPEC  120
AHMLPSQRKI STTQAIELDL AAQSGLRLGQ SFELIGREAG GRQCLGFTKL NQKNYLRTKR  180
QQSLAYGEVG NVLQYFKEKS LQNHSFFYAF QLDNEEQITN MFWADA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-40FAR1 family protein