PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028121201.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 180aa    MW: 20578 Da    PI: 9.5632
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028121201.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.5e-101565655
                    HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    + +Er+RR +++   ++L +l+P+  +++++  ls  + L +A eYIk+L+
  XP_028121201.1 15 KLVERNRRIHMKGLCFKLTSLIPPhHFRPSKDMLSQQDQLDQAAEYIKQLK 65
                    679*********************888777777****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MKKSKSSSPE KLDRKLVERN RRIHMKGLCF KLTSLIPPHH FRPSKDMLSQ QDQLDQAAEY  60
IKQLKERIEE LKARRTLAMA NTNETNKNIK DTMMFGLRLP VVELKDLGSS LEVVLISGLE  120
KNFMLYEVIS VLEDEGAEVV STSVSTMGDR VFHTLHAQVK VTRVGVETSR VCQRLHELVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.16e-29bHLH family protein