PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028121202.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 175aa    MW: 20003.3 Da    PI: 9.8124
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028121202.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.22e-101560655
                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    + +Er+RR +++   ++L +l+P+     + ++sK + L +A eYIk+L+
  XP_028121202.1 15 KLVERNRRIHMKGLCFKLTSLIPPH----HFRPSKQDQLDQAAEYIKQLK 60
                    679*********************8....79*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MKKSKSSSPE KLDRKLVERN RRIHMKGLCF KLTSLIPPHH FRPSKQDQLD QAAEYIKQLK  60
ERIEELKARR TLAMANTNET NKNIKDTMMF GLRLPVVELK DLGSSLEVVL ISGLEKNFML  120
YEVISVLEDE GAEVVSTSVS TMGDRVFHTL HAQVKVTRVG VETSRVCQRL HELVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-27bHLH family protein