PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028121384.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 428aa MW: 46450.2 Da PI: 6.7271

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028121384.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88	9.2e-28	155	209	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++++SHLQkYR++ XP_028121384.1 155 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIDCLTRHNIASHLQKYRSH 209 5689***************.******************************86 PP
2	Myb_DNA-binding	39.6	1.3e-12	158	207	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ XP_028121384.1 158 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGiDCLTRHNIASHLQKYR 207 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MLAVSALRST NDEREGQMEG FSIGGNDDFP EFSGGNLLDS IDFDDLFVGF SDGDVLPDLE 60 MDPEILAEFS ASGGEESEMN TSSAEKADDN SRKEEEDKVS GSGSGSGSGS GSSLNQGEEI 120 VSKTGESVGV NPSKKESDKG RKSSAQSKNP QGKRKVKVDW TPELHRRFVQ AVEQLGVDKA 180 VPSRILELMG IDCLTRHNIA SHLQKYRSHR KHLLAREAEA ASWSQRRHMY SGGGSKTMGA 240 WVAPSPTMGF PPPPMTPLQH FRPLHVWGHP PPPSSVNQSL MHTWPKHPPL LPPPPPVWAP 300 TPTPHPPSAR PPPDTSSFWH SRHQRVLNSL TPGTPYFPPP LATTRFSAPL IHVMYRIEPP 360 GIGVPTRQTG PHPPSDFYPS KESIDAAIGD VLGKPWLPLP LGLKPPSIDS VLGELQRQGI 420 PKIPPTCA

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MLAVSALRST NDEREGQMEG FSIGGNDDFP EFSGGNLLDS IDFDDLFVGF SDGDVLPDLE  60
MDPEILAEFS ASGGEESEMN TSSAEKADDN SRKEEEDKVS GSGSGSGSGS GSSLNQGEEI  120
VSKTGESVGV NPSKKESDKG RKSSAQSKNP QGKRKVKVDW TPELHRRFVQ AVEQLGVDKA  180
VPSRILELMG IDCLTRHNIA SHLQKYRSHR KHLLAREAEA ASWSQRRHMY SGGGSKTMGA  240
WVAPSPTMGF PPPPMTPLQH FRPLHVWGHP PPPSSVNQSL MHTWPKHPPL LPPPPPVWAP  300
TPTPHPPSAR PPPDTSSFWH SRHQRVLNSL TPGTPYFPPP LATTRFSAPL IHVMYRIEPP  360
GIGVPTRQTG PHPPSDFYPS KESIDAAIGD VLGKPWLPLP LGLKPPSIDS VLGELQRQGI  420
PKIPPTCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	3e-78	G2-like family protein