PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028121397.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HB-other

Protein Properties

Length: 1830aa MW: 205822 Da PI: 5.0072

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028121397.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.2	5.7e-18	25	79	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+ ++ + yps++ r+eL+ klgL++rq ++WF+ rR k++k XP_028121397.1 25 KRKMKTASQLEILEKTYAAETYPSEALRAELSVKLGLSDRQLQMWFCHRRLKDRK 79 89999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1830 aa Download sequence
MEGGGGGGSD GEKKKPPESG ENKVKRKMKT ASQLEILEKT YAAETYPSEA LRAELSVKLG 60 LSDRQLQMWF CHRRLKDRKT PPVKRPRKDA SPAAVVASSS GVGDEMVVGE VGNEHVSGSG 120 SGSSPFRHVE THQQPHPQHH QRVVPRTGAA IPRIAADMPA MKRYYEPPQA ISELRAIAFV 180 EAQLGEPLRE DGPILGMEFD PLPPGAFGAP IVTVGQQKPA TRLYEPNLYE RPDAKPIKGA 240 ARALHEYQFL PEQPSVRNDT YERAASSHYF SSPTDVPSGR SALPTGRSFM HGNEQVPSGY 300 GFQGQMPNLS LLPHQGRQGH PLPSTSGEYD IVPRKNSVAN IGTDAHFGAH PITGLENPFI 360 PSDRRVTTHE EDISRIERKR KSEEARIAKE VEAHEKRIRK ELEKQDILRR KREEQMRKEM 420 ERQDRERRKE EERLLREKQR EEERYQREQK REMERREKFL QKESIRAEKM RLKEELRREK 480 EAARQKAAND RATARRIAKE SMELIEDERL ELMELAASSR GLPSILSLDS ETLQNLELYR 540 DKLVEFPPKS VHLRRPFSIQ PWTDSEENIG NLLMVWRFLI NFADVLGLWP FTLDEFVQAF 600 HDYDPRLLGE IHLALLRSII KDIEDVARTP SSTGLGVNQN TAANPGGGHP QIVEGAYAWG 660 FDIRSWQRHL NPLTWPEILR QFALSAGFGP KLKKRSIEQA YLRDENEGND GEDIISNLRN 720 GAAAENALAI MQERGFSNPR RSRHRLTPGT VKFAAFHVLS LEGSNGLTIL EVAEKIQKSG 780 LRDLTTSKTP EASIAAALSR DSKLFERTAP STYCVRTPYR KDPVDTEAIL SAAREKIQIF 840 KNGYLDGEDA EDVEPDDVER DEDSESDIAE DPEADDLGTE LKPNNEALSC EANRYLAKTL 900 PADGKDTYCD EVMETPEVGV KNLGDSSPLM QSEGYKEVKS IGASVDQSID VAGICNEAAT 960 LDQEDTVIDE SNSGEPWVQG LMEGEYSDLS VEERLSALVA LIGIANEGNS IRIILEERLE 1020 AANALKKQMW AEVQLDKRRM KEEYVMKMQY PSHISDKTEP NVQISSVEGR QSPLPTVDDK 1080 NGLVSTNPVE QKEHLHDAQN DQNYTIHMPT ERNPPIQEAS TCTDNLSLLQ PGYAAERSRS 1140 QLKAYIGHKA EEMYVYRSLP LGQDRRRNRY WQFITSSSRN DPGSGRIFVE LRHGCWRLID 1200 SEEGFDALLA SLDVRGLRES NLHSMLQKVE VSFKETLRRN LAHTKAGRPI NNFKTEVSGM 1260 AYSLDCSASS DSPSCTVYVS NSDMPEPSSS FSIGLGRNET EKKDALKRYQ DFEKWMWEEC 1320 LNSSVLYAVK YGKKRCRQLL DVCDCRDVYY FEDDHCPSCH RTYETSIRDI NFSEHVAKCK 1380 EKFKGDPCWT SQGLDPSPPL RIRLHKALLA LIEVSIPIEA LQPAWSEGYR RSWGMKLHTV 1440 TSAEELLQIL TLLEVGIKKD FLSSNFETTN ELLGSCNQTE FAANVSLNSE LVSVLPWVPQ 1500 TSSAVALRLM ELDASIYYEL HQKKIDSQKD KGAGDFIMPP SKFSLVKNVP EYDLAQAPLE 1560 TENLLQEPWA DHGSLHSSSG RGRGARGRGR GGRTRGGRSQ RRAISSRSVN AQRSTTTNSE 1620 RFGQLLGWKG RSRGRGGRKR GRRTARSRQK PVKRVAEIGS ERDQPKEVLF ENTVRSSDLQ 1680 WNREEPTGTP LLGAENASSS ERSEYEDYNR QAMAEDEYDD DLMVDDYSSV FNGKSMHLME 1740 GIDYNLDGEE DDDDRAQEEG DDDADADGDG DEDEGDDSEE DGQGDTDVER YINDESDEGE 1800 EENRDGGGEQ IGNTDEGEGT GSTSSEYSDE

Sequence ? help Back to Top

Protein Sequence Length: 1830 aa Download sequence

MEGGGGGGSD GEKKKPPESG ENKVKRKMKT ASQLEILEKT YAAETYPSEA LRAELSVKLG  60
LSDRQLQMWF CHRRLKDRKT PPVKRPRKDA SPAAVVASSS GVGDEMVVGE VGNEHVSGSG  120
SGSSPFRHVE THQQPHPQHH QRVVPRTGAA IPRIAADMPA MKRYYEPPQA ISELRAIAFV  180
EAQLGEPLRE DGPILGMEFD PLPPGAFGAP IVTVGQQKPA TRLYEPNLYE RPDAKPIKGA  240
ARALHEYQFL PEQPSVRNDT YERAASSHYF SSPTDVPSGR SALPTGRSFM HGNEQVPSGY  300
GFQGQMPNLS LLPHQGRQGH PLPSTSGEYD IVPRKNSVAN IGTDAHFGAH PITGLENPFI  360
PSDRRVTTHE EDISRIERKR KSEEARIAKE VEAHEKRIRK ELEKQDILRR KREEQMRKEM  420
ERQDRERRKE EERLLREKQR EEERYQREQK REMERREKFL QKESIRAEKM RLKEELRREK  480
EAARQKAAND RATARRIAKE SMELIEDERL ELMELAASSR GLPSILSLDS ETLQNLELYR  540
DKLVEFPPKS VHLRRPFSIQ PWTDSEENIG NLLMVWRFLI NFADVLGLWP FTLDEFVQAF  600
HDYDPRLLGE IHLALLRSII KDIEDVARTP SSTGLGVNQN TAANPGGGHP QIVEGAYAWG  660
FDIRSWQRHL NPLTWPEILR QFALSAGFGP KLKKRSIEQA YLRDENEGND GEDIISNLRN  720
GAAAENALAI MQERGFSNPR RSRHRLTPGT VKFAAFHVLS LEGSNGLTIL EVAEKIQKSG  780
LRDLTTSKTP EASIAAALSR DSKLFERTAP STYCVRTPYR KDPVDTEAIL SAAREKIQIF  840
KNGYLDGEDA EDVEPDDVER DEDSESDIAE DPEADDLGTE LKPNNEALSC EANRYLAKTL  900
PADGKDTYCD EVMETPEVGV KNLGDSSPLM QSEGYKEVKS IGASVDQSID VAGICNEAAT  960
LDQEDTVIDE SNSGEPWVQG LMEGEYSDLS VEERLSALVA LIGIANEGNS IRIILEERLE  1020
AANALKKQMW AEVQLDKRRM KEEYVMKMQY PSHISDKTEP NVQISSVEGR QSPLPTVDDK  1080
NGLVSTNPVE QKEHLHDAQN DQNYTIHMPT ERNPPIQEAS TCTDNLSLLQ PGYAAERSRS  1140
QLKAYIGHKA EEMYVYRSLP LGQDRRRNRY WQFITSSSRN DPGSGRIFVE LRHGCWRLID  1200
SEEGFDALLA SLDVRGLRES NLHSMLQKVE VSFKETLRRN LAHTKAGRPI NNFKTEVSGM  1260
AYSLDCSASS DSPSCTVYVS NSDMPEPSSS FSIGLGRNET EKKDALKRYQ DFEKWMWEEC  1320
LNSSVLYAVK YGKKRCRQLL DVCDCRDVYY FEDDHCPSCH RTYETSIRDI NFSEHVAKCK  1380
EKFKGDPCWT SQGLDPSPPL RIRLHKALLA LIEVSIPIEA LQPAWSEGYR RSWGMKLHTV  1440
TSAEELLQIL TLLEVGIKKD FLSSNFETTN ELLGSCNQTE FAANVSLNSE LVSVLPWVPQ  1500
TSSAVALRLM ELDASIYYEL HQKKIDSQKD KGAGDFIMPP SKFSLVKNVP EYDLAQAPLE  1560
TENLLQEPWA DHGSLHSSSG RGRGARGRGR GGRTRGGRSQ RRAISSRSVN AQRSTTTNSE  1620
RFGQLLGWKG RSRGRGGRKR GRRTARSRQK PVKRVAEIGS ERDQPKEVLF ENTVRSSDLQ  1680
WNREEPTGTP LLGAENASSS ERSEYEDYNR QAMAEDEYDD DLMVDDYSSV FNGKSMHLME  1740
GIDYNLDGEE DDDDRAQEEG DDDADADGDG DEDEGDDSEE DGQGDTDVER YINDESDEGE  1800
EENRDGGGEQ IGNTDEGEGT GSTSSEYSDE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	14	27	KKPPESGENKVKRK
2	1581	1591	RGRGARGRGRG
3	1583	1593	RGRGARGRGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein