PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028121494.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 193aa MW: 22059.8 Da PI: 9.3292

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028121494.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63.7	3.5e-20	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l+++v+ +G + WktIa + g++R++k+c++rw++yl XP_028121494.1 16 KGAWTSEEDRKLAQYVEVHGAKKWKTIATKSGLNRCGKSCRLRWLNYL 63 79********************************************97 PP
2	Myb_DNA-binding	54.4	2.9e-17	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T eE++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_028121494.1 69 RGNITDEEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 114 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MAPKSSEGLA KKVYNKGAWT SEEDRKLAQY VEVHGAKKWK TIATKSGLNR CGKSCRLRWL 60 NYLRPNIKRG NITDEEEDLI LRLHKLLGNR WSLIAGRLPG RTDNEIKNYW NSHLSRKINQ 120 KGKMTTTSPE QESTPEKTAD SDVKREGTKG SGDGEFMLDV NEFFDFSTGG TYGLDWVNKF 180 LELDDDQALT DKW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G40330.1	2e-54	MYB family protein