PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028121495.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 167aa MW: 18993.4 Da PI: 8.6652

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028121495.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	64.1	2.7e-20	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l+++v+ +G + WktIa + g++R++k+c++rw++yl XP_028121495.1 16 KGAWTSEEDRKLAQYVEVHGAKKWKTIATKSGLNRCGKSCRLRWLNYL 63 79********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
MAPKSSEGLA KKVYNKGAWT SEEDRKLAQY VEVHGAKKWK TIATKSGLNR CGKSCRLRWL 60 NYLRPNIKRG NITDEEEDLI LRLHKLLGNR KINQKGKMTT TSPEQESTPE KTADSDVKRE 120 GTKGSGDGEF MLDVNEFFDF STGGTYGLDW VNKFLELDDD QALTDKW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G40330.1	1e-35	MYB family protein