PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028121527.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HB-other
Protein Properties Length: 122aa    MW: 13832.3 Da    PI: 10.4284
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028121527.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox48.31.7e-154592754
                    --HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54
                    f +  ++ L + F++n+yp+++++e+LA++l++t +qV+ WF N R k
  XP_028121527.1 45 FGEAVTQGLAKSFNENHYPDRAMKEKLATELEITVKQVSKWFANARWK 92
                    67788999**************************************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MQHSQGESEH TPKKRAHEEL DVEGTNNSPA KFYERGSNGT STKRFGEAVT QGLAKSFNEN  60
HYPDRAMKEK LATELEITVK QVSKWFANAR WKFHHPLPAR QRSTTSGVRK RKSTPDDHQG  120
SG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19510.16e-13HB-PHD family protein