PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028121891.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 180aa    MW: 20411.2 Da    PI: 8.3658
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028121891.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR187.71.6e-2758147190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++GFs+r+++ kk+k +++i++r++vC+keg+r+ +k++   ++++raetrtgC+a+l vk++  +gk++v++++++HnHel+
  XP_028121891.1  58 DFYNAYGGRMGFSIRREYCKKNKLTKQIISRNLVCNKEGFRKVDKRD-PLTKTPRAETRTGCEARLFVKLDVnSGKFVVIDFKEKHNHELV 147
                     6*******************************************999.9999*******************99****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MVNQAPANQS STSSSTEGNL CHGWATLLRF YMDMEPDNDC GWKPKVGMTF DSEESAYDFY  60
NAYGGRMGFS IRREYCKKNK LTKQIISRNL VCNKEGFRKV DKRDPLTKTP RAETRTGCEA  120
RLFVKLDVNS GKFVVIDFKE KHNHELVSLD CAHMLPSQRK ISDTQAIELD LASESGLRLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.24e-26FAR1 family protein