PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028122003.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 678aa MW: 77376.8 Da PI: 8.1144

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028122003.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	40.7	7.7e-13	58	132	22	90
FAR1 22 skrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 +k+ g++++r + Cs+eg+r ++ + +ek+r ++a tr+gCka+++++ + k++vt+++ +HnHel+ XP_028122003.1 58 KKEMGKVVSRLWLCSREGQRLPKYLDrvAEKSRAPKALTRVGCKAQFRIRYDAdageGRKYVVTHFVADHNHELT 132 5678899***********99988877899999************9886666789***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MAPTEVKREG DDYDIPNEAD DICLMNESRA KPDHGCEAGP SNEEATNMNV EDGGADVKKE 60 MGKVVSRLWL CSREGQRLPK YLDRVAEKSR APKALTRVGC KAQFRIRYDA DAGEGRKYVV 120 THFVADHNHE LTEQHCVMYL RSHRSLNSAD KAQAMAMRNV GVKTSQIMDY MVNQSGSYEN 180 VGFIRTDLHN HIQAERRAEV EDGDAQGALV YLCAKLDVDA RFFLQAMGNK APVSVLTDGD 240 KAMREAIRRV FPDARHRLCN WHLGKNAVSN VHISGFAHAF KQCMDMETDE TKFEHGWTTT 300 VEKFGLQTNS WVLETYEKRH MWAEAYMRGH FFAGMKSTQR SECMNAYFNP FLQHKLKLYE 360 FVRHYDRALA RIRMFRDEIL EEGKLNVKDV FPLLDGQKCY YIHMYKVKDR SWIVTHSPMD 420 AAMRCSCMKF ESLGLPCCHM ICVMKAENLT QIPPTCVLHK WTRVASKDGQ QWPQPSIDST 480 TIQTARYGIL SSSYNEMCFY ASQSTEGFKE ARDPCLPMTI RMKELYERNL NGGNGDKGKH 540 SFRRQFGVED PDVVKTKGNP GWASSNCRRP RKCENCKCIG PTKRTCPKVR FSRTLGTNSD 600 ADTPHITDRE YNAESLPVRC KTGLMDPSTP HIKQRRLFFD VSPDSKQPMG QYGSAEAAVW 660 KNDSNTIDEV NQVDSTSY

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MAPTEVKREG DDYDIPNEAD DICLMNESRA KPDHGCEAGP SNEEATNMNV EDGGADVKKE  60
MGKVVSRLWL CSREGQRLPK YLDRVAEKSR APKALTRVGC KAQFRIRYDA DAGEGRKYVV  120
THFVADHNHE LTEQHCVMYL RSHRSLNSAD KAQAMAMRNV GVKTSQIMDY MVNQSGSYEN  180
VGFIRTDLHN HIQAERRAEV EDGDAQGALV YLCAKLDVDA RFFLQAMGNK APVSVLTDGD  240
KAMREAIRRV FPDARHRLCN WHLGKNAVSN VHISGFAHAF KQCMDMETDE TKFEHGWTTT  300
VEKFGLQTNS WVLETYEKRH MWAEAYMRGH FFAGMKSTQR SECMNAYFNP FLQHKLKLYE  360
FVRHYDRALA RIRMFRDEIL EEGKLNVKDV FPLLDGQKCY YIHMYKVKDR SWIVTHSPMD  420
AAMRCSCMKF ESLGLPCCHM ICVMKAENLT QIPPTCVLHK WTRVASKDGQ QWPQPSIDST  480
TIQTARYGIL SSSYNEMCFY ASQSTEGFKE ARDPCLPMTI RMKELYERNL NGGNGDKGKH  540
SFRRQFGVED PDVVKTKGNP GWASSNCRRP RKCENCKCIG PTKRTCPKVR FSRTLGTNSD  600
ADTPHITDRE YNAESLPVRC KTGLMDPSTP HIKQRRLFFD VSPDSKQPMG QYGSAEAAVW  660
KNDSNTIDEV NQVDSTSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-34	FAR1 family protein