PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028122067.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 473aa MW: 53676.4 Da PI: 6.4105

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028122067.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.1	8e-20	92	185	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs+rks+ +++ ++g++++r + Cs++g+r ++ + +ek++ ++a tr+gCka+++ + + gk++vt+++ +HnHela XP_028122067.1 92 FYNAYAKAKGFSIRKSRFNTN-KQGKVVSRLWLCSRKGQRLPNYLDrvAEKSKAPKALTRVGCKAQFRRQYDPdageGGKYVVTHFVANHNHELA 185 9**************9999.666699999******9988877888999**********99887666789************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MALAKVKRKG DDYDIPNEVD GIHLINESRV EPYYGCEAGP SNQEATNINV EDGGTDVKQE 60 MVDDAHWNDM VSDVEHALLE QKFDSVEDGE AFYNAYAKAK GFSIRKSRFN TNKQGKVVSR 120 LWLCSRKGQR LPNYLDRVAE KSKAPKALTR VGCKAQFRRQ YDPDAGEGGK YVVTHFVANH 180 NHELAEQHYV MYLRSHRGLN SADKAQAMVT HNVGVKTSQI MDYMVNQSES YENDNKLQNP 240 FWADSKSRAG YAKFGDVLIF DSTYRTNAYT KPFVMLAGVT NHFTTMIFAC VLLANETIDT 300 YTWVLETFIE AMGNKAPVSV LIDGDKAMRE AIRRVFPDAR HRLCNWHLGK NVVSNVHKSG 360 FAHAFKQCMD METDEAKFED GWTRMVEKLD FKPIAGHYDR ALTRIRYNEA RDDAETNNTF 420 PPVGQYGSVE ATVCKNDLTT IDEVNQIPIA GCLFVFHSWL DLTEGFLAVW FIS

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MALAKVKRKG DDYDIPNEVD GIHLINESRV EPYYGCEAGP SNQEATNINV EDGGTDVKQE  60
MVDDAHWNDM VSDVEHALLE QKFDSVEDGE AFYNAYAKAK GFSIRKSRFN TNKQGKVVSR  120
LWLCSRKGQR LPNYLDRVAE KSKAPKALTR VGCKAQFRRQ YDPDAGEGGK YVVTHFVANH  180
NHELAEQHYV MYLRSHRGLN SADKAQAMVT HNVGVKTSQI MDYMVNQSES YENDNKLQNP  240
FWADSKSRAG YAKFGDVLIF DSTYRTNAYT KPFVMLAGVT NHFTTMIFAC VLLANETIDT  300
YTWVLETFIE AMGNKAPVSV LIDGDKAMRE AIRRVFPDAR HRLCNWHLGK NVVSNVHKSG  360
FAHAFKQCMD METDEAKFED GWTRMVEKLD FKPIAGHYDR ALTRIRYNEA RDDAETNNTF  420
PPVGQYGSVE ATVCKNDLTT IDEVNQIPIA GCLFVFHSWL DLTEGFLAVW FIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-50	FAR1 family protein