PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028122191.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 398aa MW: 45573.6 Da PI: 6.7885

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028122191.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168	3.1e-52	16	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd+++k++ +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_028122191.1 16 VPPGFRFHPTEEELLQYYLRKKVSFEKIDL-DVIRDVDLNKLEPWDIQEKCRIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVI 109 69**************************.9***********964443122456******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s +++ +g++ktLvfykgrap+g+k+dW+mheyrl XP_028122191.1 110 YS-NSKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 144 .9999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MPEKTMSISV NGQSQVPPGF RFHPTEEELL QYYLRKKVSF EKIDLDVIRD VDLNKLEPWD 60 IQEKCRIGST PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKVIY SNSKRIGMRK 120 TLVFYKGRAP HGQKSDWIMH EYRLDDNICD TNNVPDATGD ATQEEGWVVC RIFKKKNHHK 180 TLDNNSSSPF NSSIINLETT RTQIPTSSDE GTLEQILHYL GRSCKKEDHH DSTINNTPGF 240 LMPIIDTTTI TKHGLHDRFM KLPSLESPNS TNNSQPCYQQ IQQQQMLTDN DETGLRDWTA 300 LDRLVASHLN GQTETSKQIT SCFNDPNMGF CSLTYHDLQL QQQEQQQQLR SSSSSPSNRP 360 PFHGTPSQDE NGDFDLWSFT RSSLSSTDPL CHMSNTPV

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MPEKTMSISV NGQSQVPPGF RFHPTEEELL QYYLRKKVSF EKIDLDVIRD VDLNKLEPWD  60
IQEKCRIGST PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKVIY SNSKRIGMRK  120
TLVFYKGRAP HGQKSDWIMH EYRLDDNICD TNNVPDATGD ATQEEGWVVC RIFKKKNHHK  180
TLDNNSSSPF NSSIINLETT RTQIPTSSDE GTLEQILHYL GRSCKKEDHH DSTINNTPGF  240
LMPIIDTTTI TKHGLHDRFM KLPSLESPNS TNNSQPCYQQ IQQQQMLTDN DETGLRDWTA  300
LDRLVASHLN GQTETSKQIT SCFNDPNMGF CSLTYHDLQL QQQEQQQQLR SSSSSPSNRP  360
PFHGTPSQDE NGDFDLWSFT RSSLSSTDPL CHMSNTPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-119	NAC family protein