PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028122241.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 908aa MW: 104377 Da PI: 6.2717

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028122241.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.7	1.3e-25	60	146	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 kfY++YA vGFsvrk+ ++sk +g++++r+f+Cskeg+r+++k++ ++ +++r+etrtgC a++ ++++ dg +++t++e++HnHe XP_028122241.1 60 KFYCKYAGLVGFSVRKDWVNRSKVHGRVVSRKFTCSKEGYRRKDKRD-VNVKKHRKETRTGCLAHMIITRQPDGIYRITHFEENHNHE 146 6*****************************************999.999**********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 908 aa Download sequence
MDIRCQTSNN LDLNIEHDCC SPKVAHVGSV QSTLSSKDDS NSDGVLKIGM EFESDEYAYK 60 FYCKYAGLVG FSVRKDWVNR SKVHGRVVSR KFTCSKEGYR RKDKRDVNVK KHRKETRTGC 120 LAHMIITRQP DGIYRITHFE ENHNHENVNP SNAQNLQELP SQGTIDGAGV TEADSTINLE 180 RQSQLAFQLL GRQFGARENL DYPAIDFENY LKSGRIRDLK EGEAGRLLYY FQRQHFENPS 240 FFYAIQLDVD DKISNIFWAD DNMVVDYDHF GNVVCLDTTY RTQKDFRPLV QFLGLNHHRQ 300 VVIFGAALMY DETIDSLKWL FRTFIEAMSR KKPEAILTDQ DATIIQAIDS EIPETNHRVC 360 IWQMYQNALK HLSHVTKDAD SFAKVLRSCI FDHEDEEDFI HAWDDMVDKF TLRQNEWLRW 420 MFREKENWAV VYGKNSFFID VKSTHLVENF SNNLKNYLNS DLDVLQFFTH FESMVNKQRY 480 NELEANYDMG RCTPRLMANV VLLKHASDLY TPKAFEVFQR EYEKCLNIVV NLFSENGSLF 540 EYKANTYGQP REYTVTFNSS DGTVTCGCMK FEYVGILCCH ALKVLDHRNI KVVPTCYILK 600 RWTRDARVES FRECAISVEE ESPKSITASR YRKLCQSLLK ISARAAESNQ AFEFAARQLE 660 GVMQGVEKIL TLKPSEETQA ITSSSTGAYA SESEQAEIFL DRNAIEGQDD SNTFRGTNER 720 ETTAPDEDPL NNLVEKISKT KTSQNVHSLP PDTVASISCP QPAYVSSASS SLNPVTQGFY 780 NFEANQVVQC LYQPPNLSMA QQPNPDIYQP PNLFSNQHDS PSQAQLLQES LIRSPFQEPM 840 SHRNQLRQWI SMSNIHIRPH SFIMITDTEH QMANILGPNN DVKKIVHHSS HLVNVILVLY 900 ISSNACLF

Sequence ? help Back to Top

Protein Sequence Length: 908 aa Download sequence

MDIRCQTSNN LDLNIEHDCC SPKVAHVGSV QSTLSSKDDS NSDGVLKIGM EFESDEYAYK  60
FYCKYAGLVG FSVRKDWVNR SKVHGRVVSR KFTCSKEGYR RKDKRDVNVK KHRKETRTGC  120
LAHMIITRQP DGIYRITHFE ENHNHENVNP SNAQNLQELP SQGTIDGAGV TEADSTINLE  180
RQSQLAFQLL GRQFGARENL DYPAIDFENY LKSGRIRDLK EGEAGRLLYY FQRQHFENPS  240
FFYAIQLDVD DKISNIFWAD DNMVVDYDHF GNVVCLDTTY RTQKDFRPLV QFLGLNHHRQ  300
VVIFGAALMY DETIDSLKWL FRTFIEAMSR KKPEAILTDQ DATIIQAIDS EIPETNHRVC  360
IWQMYQNALK HLSHVTKDAD SFAKVLRSCI FDHEDEEDFI HAWDDMVDKF TLRQNEWLRW  420
MFREKENWAV VYGKNSFFID VKSTHLVENF SNNLKNYLNS DLDVLQFFTH FESMVNKQRY  480
NELEANYDMG RCTPRLMANV VLLKHASDLY TPKAFEVFQR EYEKCLNIVV NLFSENGSLF  540
EYKANTYGQP REYTVTFNSS DGTVTCGCMK FEYVGILCCH ALKVLDHRNI KVVPTCYILK  600
RWTRDARVES FRECAISVEE ESPKSITASR YRKLCQSLLK ISARAAESNQ AFEFAARQLE  660
GVMQGVEKIL TLKPSEETQA ITSSSTGAYA SESEQAEIFL DRNAIEGQDD SNTFRGTNER  720
ETTAPDEDPL NNLVEKISKT KTSQNVHSLP PDTVASISCP QPAYVSSASS SLNPVTQGFY  780
NFEANQVVQC LYQPPNLSMA QQPNPDIYQP PNLFSNQHDS PSQAQLLQES LIRSPFQEPM  840
SHRNQLRQWI SMSNIHIRPH SFIMITDTEH QMANILGPNN DVKKIVHHSS HLVNVILVLY  900
ISSNACLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-103	FAR1 family protein