PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028122247.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 348aa MW: 40582.4 Da PI: 6.6011

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028122247.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.5	8.6e-56	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL++k++ ++++l +vik+vd+yk+ePwdL++ ++ + e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_028122247.1 7 VPPGFRFHPTDEELVDYYLRRKIACRRIDL-DVIKDVDLYKIEPWDLQElcRIGTeEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAI 100 69**************************.9***********954555442556******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s k+ l+g++ktLvfykgrap+g+k+dW+mheyrle XP_028122247.1 101 YS-KHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 .8899****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MNTFSHVPPG FRFHPTDEEL VDYYLRRKIA CRRIDLDVIK DVDLYKIEPW DLQELCRIGT 60 EEQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLTT TRKLSEHDSP IWYDDQVSFM 180 PDLDSPKHNS QPNLTYHHHH PYPCKKELDH LQYQIPHGNF LHLPLLDSPK LLQPTPTMAT 240 YGLDMNHGNT LQSSSLTQEE HNFNSVYGGN SNNEQAVDQV TDWRVLDKFV ASQLSHEDLP 300 KEKDYPNAAN MFHPSEQSNL LIQQLNKQEI GPENASTSTS SCQMDLWK

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MNTFSHVPPG FRFHPTDEEL VDYYLRRKIA CRRIDLDVIK DVDLYKIEPW DLQELCRIGT  60
EEQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLTT TRKLSEHDSP IWYDDQVSFM  180
PDLDSPKHNS QPNLTYHHHH PYPCKKELDH LQYQIPHGNF LHLPLLDSPK LLQPTPTMAT  240
YGLDMNHGNT LQSSSLTQEE HNFNSVYGGN SNNEQAVDQV TDWRVLDKFV ASQLSHEDLP  300
KEKDYPNAAN MFHPSEQSNL LIQQLNKQEI GPENASTSTS SCQMDLWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-127	NAC family protein