PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028122302.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 183aa    MW: 19764.3 Da    PI: 8.2107
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028122302.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1855.8e-5825121197
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdr+lPian+srimkk+lPan+ki+kdak+tvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy++plk+yl++yreleg
  XP_028122302.1  25 VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLTRYRELEG 119
                     69********************************************************************************************* PP

           NF-YB  96 ek 97 
                     ++
  XP_028122302.1 120 DT 121
                     97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MADAPASPAG GSHESGGDQS PRSNVREQDR YLPIANISRI MKKALPANGK IAKDAKDTVQ  60
ECVSEFISFI TSEASDKCQK EKRKTINGDD LLWAMATLGF EDYIDPLKAY LTRYRELEGD  120
TKGSARSGDG SSKKDAVGAQ LGPNAQFAHQ GSFTQGMNXX IXPSVNSKHR DSNLVVSPMQ  180
GTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.18e-85NF-YB family protein