PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028122460.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 324aa    MW: 36693.5 Da    PI: 6.19
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028122460.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.24.7e-16147194355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+h  +Er+RR+r+N+++  L +l+P +     kK++Ka+iL+ A++YIk+Lq
  XP_028122460.1 147 RNHILAERKRRERLNQKLISLSTLIPGL-----KKMDKASILQDAIKYIKHLQ 194
                     789*************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MDILPTDWLH DLEMEESNLI RQCQVDSVDY SLDEINFTCF SPEVYASLSN ESTHTEINIS  60
KLGKELKTNN DNSHDNGNAI LLGQSSSPST NSLQNENPNE DDAMSQDYIN FSSFSSRSSQ  120
ENLNERPKSC NRTKKLCATS RAPVQARNHI LAERKRRERL NQKLISLSTL IPGLKKMDKA  180
SILQDAIKYI KHLQEHVQTL EKRAKKKLVE PTIHSMTKCG PSWEDDNVSS NENLDENFKK  240
LSPEIEVRIL EKNVLFRIHC KKNGDVVAKI LSKMSALHLD VVSSSVLPFG VALEITIVAQ  300
VDEEFHMTVE DLVKNLRSVV LSFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153158ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-53bHLH family protein