PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028122699.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 601aa MW: 69572.4 Da PI: 6.2625

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028122699.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.6	4.9e-14	87	141	1	56
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtra 56 +fYn+Y+ +vGFs+rk++ +ks ++ eit+rtfvCskeg r+ +k++ +++ XP_028122699.1 87 EFYNSYGGRVGFSIRKEYAHKS-KTSEITSRTFVCSKEGLRKYDKRDFALDTEEQI 141 6******************9.5556***************999444444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MADLTTSSAI PFLASIPAAN AKTELSIEVS SRNYSNFPED GSLTLVLDIS KIDDLTIATQ 60 MDVHGEDDTQ CKSILGMEFD SEQSAYEFYN SYGGRVGFSI RKEYAHKSKT SEITSRTFVC 120 SKEGLRKYDK RDFALDTEEQ ITNIFWADAR MIIDYGQFGD VVTFDTAYKI NRESCPFAIF 180 VGFNNHRETI VFGAALMYDE TTDSFIWLFK AFLEAMSNKH PKTIFTDQDA AMAKAISYVM 240 PNTYHRLCTW HMMQNAVKHM SGIFSGPGRV RSVLGKFIYE YEEEEEFFAA WNAMLYEFDV 300 HDNSWLQSIF HLRKKWVRAY VRWTWSAGMK STQLSESLNA DLKEYLRSYY NLIQFFIHFE 360 RVLNEKRYKE YEAEYALLYK LPRIKVQVLM LTQAGDVYTK TIFEEFQDEY VGSLELYVAN 420 CVHKDDCLVY IVKAYRQSTM REVKKDKDGN LSCSCRLFEM KGILCSHVIK VLKDEMIIME 480 IPSQYILKRW TKLARAEIVQ DYKGRDIQAD PKLEQSSRYK SLCSLFTMIS SQASELEETY 540 EDCVQEGKKL LAFVQNKLRI RITNGPLNLN DASSTMRMNE GSENVIQAKG LKKRIDPICG 600 R

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MADLTTSSAI PFLASIPAAN AKTELSIEVS SRNYSNFPED GSLTLVLDIS KIDDLTIATQ  60
MDVHGEDDTQ CKSILGMEFD SEQSAYEFYN SYGGRVGFSI RKEYAHKSKT SEITSRTFVC  120
SKEGLRKYDK RDFALDTEEQ ITNIFWADAR MIIDYGQFGD VVTFDTAYKI NRESCPFAIF  180
VGFNNHRETI VFGAALMYDE TTDSFIWLFK AFLEAMSNKH PKTIFTDQDA AMAKAISYVM  240
PNTYHRLCTW HMMQNAVKHM SGIFSGPGRV RSVLGKFIYE YEEEEEFFAA WNAMLYEFDV  300
HDNSWLQSIF HLRKKWVRAY VRWTWSAGMK STQLSESLNA DLKEYLRSYY NLIQFFIHFE  360
RVLNEKRYKE YEAEYALLYK LPRIKVQVLM LTQAGDVYTK TIFEEFQDEY VGSLELYVAN  420
CVHKDDCLVY IVKAYRQSTM REVKKDKDGN LSCSCRLFEM KGILCSHVIK VLKDEMIIME  480
IPSQYILKRW TKLARAEIVQ DYKGRDIQAD PKLEQSSRYK SLCSLFTMIS SQASELEETY  540
EDCVQEGKKL LAFVQNKLRI RITNGPLNLN DASSTMRMNE GSENVIQAKG LKKRIDPICG  600
R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-75	FAR1 family protein