PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028122749.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 219aa    MW: 25565.6 Da    PI: 7.9673
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028122749.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR180.53e-2531119190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++GFs+r+ + +ks ++g+it+r+fvC+keg+r  +k++   ++++r+e rtgC+a+l++k ++  +k+ v++++++HnH ++
  XP_028122749.1  31 DFYNTYGGRLGFSIRRGYVNKS-KEGQITSRQFVCNKEGFRVVDKRD-PLTKNPRQEVRTGCQARLVIKWDRnMQKFLVSDFVEQHNHIFV 119
                     6********************9.6666****************9999.999******************999899*************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MEPNNHDNDG GECDWKPRVR MTFDTEQETY DFYNTYGGRL GFSIRRGYVN KSKEGQITSR  60
QFVCNKEGFR VVDKRDPLTK NPRQEVRTGC QARLVIKWDR NMQKFLVSDF VEQHNHIFVP  120
TECTHMSPSQ RKIFASQATE IDLGEKSRIH LNAAFELMGN EVGGRESLGF TRLDQKKILR  180
TKRQNSLAYG EADSILQYFR DKSLENPSFF YSVQLDNEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-34FAR1 family protein