PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028122797.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 327aa    MW: 36883.8 Da    PI: 4.7134
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028122797.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR187.32.2e-27237324291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fYn+YA++vGF +r+sk ++s+++g+ + r +vC+ke +r ++k++  k  r+r+etr+gC+a++ v+k ++gkw+vtk+++eH+H+++p
  XP_028122797.1 237 FYNAYATRVGFVIRVSKLSRSRHDGSAIGRALVCNKERFRMPDKRE--KIVRQRTETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPFTP 324
                     ******************************************9988..9*************************************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MDVSFSGILS YLEGTAEEKL QNNECTPADL CYSLQETVFP MLVEITERAM AHCDKKDVLI  60
VGGVGCNERL QEMMRIMCSE RGGRLFATDD RYCIDNGAMI AYTGLLAYAN GMSTPLEEST  120
FTQRFRTDEV LAIWREKMEL SNGLMEKSTY MFQVDFEVDS DANGEVVGNS VDVEYRAGDE  180
NGMGGNSVEE LFQQNQDDKV TQVLSGKEMI PVDEPQAPVD EPYLNQEFEP EAEAYAFYNA  240
YATRVGFVIR VSKLSRSRHD GSAIGRALVC NKERFRMPDK REKIVRQRTE TRVGCRAMIL  300
VRKVSSGKWV VTKFVKEHTH PFTPGKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-48FAR1 family protein