PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028122837.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 256aa    MW: 29929.5 Da    PI: 5.3217
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028122837.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR181.41.5e-2578168190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fY +Y++++GF++r++++++s+ n++++ ++fvCskeg+r+++   ++++    + ++tr gC+a++++ +++  kw++tk+ +eH+H+l+
  XP_028122837.1  78 EFYVTYGRNIGFTIRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVYRKDR-VlpPPPVTREGCQAMMRLALRDGVKWVITKFIKEHSHKLM 168
                     6******************************************99883333.234899********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MENASSNGFD SDESDLDLQF ESYGEHERIE KEHPNNLDFC VGEDDNMVEQ SAEELSSNVE  60
ALEPYVGMEF NSRDEAREFY VTYGRNIGFT IRIHHNRRSR VNNQVIGQDF VCSKEGFRAK  120
KYVYRKDRVL PPPPVTREGC QAMMRLALRD GVKWVITKFI KEHSHKLMSP GKVPWRGSVK  180
HLVSEDEKDK RIRELSLELY NERQKCKRRC AVYEEQLNMI LKDLEKHTEH ISNKVADIVQ  240
SIKEIEEKSE ESDADE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.12e-38FAR1 family protein