PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028122838.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 248aa    MW: 28908.5 Da    PI: 6.19
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028122838.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.91.3e-2674165191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +fY+ Y++ vGF++r++++++s ++++++ r+fvCskeg+r++++ k+e++     r+ tr gC+a+l++  +++gkw+v+ +++eHnHel+p
  XP_028122838.1  74 EFYEMYGRCVGFTIRNNRTRRSLKDNSVIGREFVCSKEGFRADKHAKRENR-IlpLRPATREGCNAMLRIAAKDKGKWVVYGFVKEHNHELNP 165
                     6******************************************99883322.24489*********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MASTPGQGFN SNRIYRRWLA ETFDSHETVE DDPSDNLNGT DDIMKPSVEN LPLSLEPLEP  60
IIGMEFESAE DAREFYEMYG RCVGFTIRNN RTRRSLKDNS VIGREFVCSK EGFRADKHAK  120
RENRILPLRP ATREGCNAML RIAAKDKGKW VVYGFVKEHN HELNPSKIPP RRSHRIAFCE  180
DEKDLKIREL STELHRERKR SAAYQEQLQM ILKYVEEHTR RLSLNVQVVS DKLRELESEG  240
EQDDLDLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.16e-49FAR1 family protein